Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 15 protein | PQ455_11310 | Q978S7 | - | 2364087 - 2365871 | 65416.0 |
| gfo/idh/moca family oxidoreductase | PQ455_11315 | Q07982 | - | 2365934 - 2367049 | 40381.6 |
| duf3072 domain-containing protein | PQ455_11320 | Not Available | - | 2367278 - 2367505 | 7970.14 |
| phb depolymerase family esterase | PQ455_11325 | P52090 | - | 2367624 - 2368715 | 37845.9 |
| hypothetical protein | PQ455_11330 | Not Available | - | 2368747 - 2369148 | 14293.4 |
| cation transporter | PQ455_11335 | Not Available | - | 2369223 - 2370143 | 33507.7 |
| hypothetical protein | PQ455_11340 | Not Available | - | 2370140 - 2370559 | 15403.5 |
| duf4126 family protein | PQ455_11345 | Not Available | - | 2370584 - 2371048 | 15528.2 |
| c-type cytochrome | PQ455_11350 | D5WYQ6 | - | 2371076 - 2372146 | 38006.6 |
| cytochrome c oxidase assembly protein | PQ455_11355 | Not Available | - | 2372143 - 2372724 | 19808.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.