Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | PQ455_11260 | Q48IV1 | + | 2350425 - 2353271 | 105242.0 |
| sdr family oxidoreductase | PQ455_11265 | Q28IU1 | - | 2353573 - 2354361 | 27575.2 |
| efflux rnd transporter permease subunit | PQ455_11270 | O31501 | - | 2354358 - 2357453 | 112101.0 |
| efflux rnd transporter periplasmic adaptor subunit | PQ455_11275 | C9XVZ5 | - | 2357450 - 2358541 | 37034.2 |
| tetr/acrr family transcriptional regulator | PQ455_11280 | P32398 | - | 2358617 - 2359237 | 22564.0 |
| efflux transporter outer membrane subunit | PQ455_11285 | P24145 | + | 2359333 - 2360769 | 49904.8 |
| alpha/beta hydrolase | PQ455_11290 | O07015 | + | 2361020 - 2361808 | 28375.5 |
| pas domain-containing sensor histidine kinase | PQ455_11295 | Q9HWR3 | + | 2361825 - 2362943 | 40381.6 |
| response regulator | PQ455_11300 | Q0PEV3 | - | 2362940 - 2363290 | 12448.0 |
| dde-type integrase/transposase/recombinase | PQ455_11305 | Not Available | + | 2363496 - 2363948 | 16674.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.