Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | PQ455_11210 | P9WMY4 | - | 2339882 - 2341036 | 41809.0 |
| duf2141 domain-containing protein | PQ455_11215 | Not Available | - | 2341033 - 2341548 | 18414.5 |
| hypothetical protein | PQ455_11220 | Not Available | - | 2341545 - 2342459 | 32509.2 |
| polysaccharide deacetylase family protein | PQ455_11225 | Not Available | - | 2342551 - 2343348 | 29222.1 |
| rna polymerase sigma factor | PQ455_11230 | P23484 | + | 2343531 - 2344046 | 18685.2 |
| fecr domain-containing protein | PQ455_11235 | Not Available | + | 2344043 - 2344993 | 33149.4 |
| tonb-dependent receptor | PQ455_11240 | P17315 | + | 2345070 - 2347343 | 80380.2 |
| glycosyltransferase | PQ455_11245 | A5U3B9 | + | 2347330 - 2348442 | 38564.4 |
| dde-type integrase/transposase/recombinase | PQ455_11250 | P14506 | + | 2348817 - 2349068 | 10327.5 |
| duf2155 domain-containing protein | PQ455_11255 | P17985 | - | 2349141 - 2350242 | 39383.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.