Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acyltransferase family protein | PQ455_10960 | Q0KBP1 | - | 2287174 - 2288355 | 40799.3 |
| fad-dependent oxidoreductase | PQ455_10965 | X5CY81 | - | 2288397 - 2289626 | 43395.1 |
| amidohydrolase family protein | PQ455_10970 | Q8R5M5 | - | 2289623 - 2290741 | 39699.4 |
| alpha/beta fold hydrolase | PQ455_10975 | Q52036 | - | 2290650 - 2291501 | 30747.1 |
| sdr family oxidoreductase | PQ455_10980 | A5W4G5 | - | 2291512 - 2292258 | 25953.4 |
| voc family protein | PQ455_10985 | Q53034 | - | 2292258 - 2293178 | 34076.5 |
| aromatic-ring-hydroxylating dioxygenase subunit beta | PQ455_10990 | Q51975 | - | 2293201 - 2293725 | 19680.3 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | PQ455_10995 | Q51974 | - | 2293722 - 2295017 | 48655.9 |
| 2fe-2s iron-sulfur cluster-binding protein | PQ455_11000 | P37098 | - | 2295041 - 2295361 | 11346.3 |
| enoyl-coa hydratase-related protein | PQ455_11005 | P24162 | + | 2295513 - 2296277 | 26269.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.