Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system f family protein | PQ455_10910 | Not Available | + | 2279493 - 2280449 | 34830.3 |
| type ii secretion system f family protein | PQ455_10915 | Not Available | + | 2280454 - 2281440 | 35960.9 |
| hypothetical protein | PQ455_10920 | Q0BZ42 | + | 2281627 - 2282133 | 18511.0 |
| duf1134 domain-containing protein | PQ455_10925 | Not Available | - | 2282268 - 2283068 | 27298.4 |
| Trna-ser | Not Available | Not Available | + | 2283208 - 2283297 | Not Available |
| parb/srx family n-terminal domain-containing protein | PQ455_10935 | P76068 | + | 2283909 - 2284262 | 12548.3 |
| duf2155 domain-containing protein | PQ455_10940 | P0C1L0 | + | 2284286 - 2284952 | 24531.7 |
| is6 family transposase | PQ455_10945 | P0C1L0 | + | 2285189 - 2285911 | 28723.9 |
| duf2924 domain-containing protein | PQ455_10950 | Not Available | - | 2286051 - 2286374 | 11886.5 |
| duf3489 domain-containing protein | PQ455_10955 | Not Available | - | 2286465 - 2286947 | 16713.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.