Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| replication-associated recombination protein a | PQ455_10860 | P0AAZ6 | + | 2271323 - 2272633 | 47250.6 |
| hypothetical protein | PQ455_10865 | Not Available | + | 2272630 - 2272962 | 12155.5 |
| brna antitoxin family protein | PQ455_10870 | Not Available | - | 2272981 - 2273235 | 9141.76 |
| brnt family toxin | PQ455_10875 | Not Available | - | 2273189 - 2273470 | 10827.8 |
| fad-dependent oxidoreductase | PQ455_10880 | Q9HXE3 | - | 2273545 - 2274669 | 39025.6 |
| prepilin peptidase | PQ455_10885 | Not Available | + | 2274718 - 2275185 | 16598.4 |
| flp pilus assembly protein cpab | PQ455_10890 | Not Available | + | 2275229 - 2276254 | 35086.3 |
| type ii and iii secretion system protein family protein | PQ455_10895 | P55702 | + | 2276256 - 2277839 | 53977.9 |
| cpad family pilus assembly lipoprotein | PQ455_10900 | Not Available | + | 2277857 - 2278237 | 12873.4 |
| pilus assembly protein cpae | PQ455_10905 | Q55900 | + | 2278234 - 2279493 | 44231.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.