Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | PQ455_10810 | Q5UYM0 | + | 2263916 - 2264911 | 35258.5 |
| acetyl-coa c-acetyltransferase | PQ455_10815 | P54810 | + | 2264950 - 2266122 | 39945.0 |
| iron-containing redox enzyme family protein | PQ455_10820 | Not Available | - | 2266200 - 2267099 | 33366.6 |
| peroxiredoxin | PQ455_10825 | Q53212 | - | 2267316 - 2267879 | 20843.6 |
| atp-binding cassette domain-containing protein | PQ455_10830 | P63358 | - | 2267915 - 2268679 | 27598.5 |
| abc transporter permease | PQ455_10835 | Q1RGU3 | - | 2268679 - 2269479 | 28095.2 |
| gfa family protein | PQ455_10840 | Q9CXS4 | - | 2269538 - 2269903 | 13390.1 |
| pp_02138 | PQ455_10845 | Not Available | - | 2269900 - 2270271 | Not Available |
| duf2218 domain-containing protein | PQ455_10850 | Not Available | - | 2270353 - 2270643 | 10356.3 |
| padr family transcriptional regulator | PQ455_10855 | P64588 | - | 2270643 - 2271227 | 21064.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.