Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase y family protein | PQ455_08005 | Q9A3J2 | + | 1685618 - 1687147 | 55614.9 |
| error-prone dna polymerase | PQ455_08010 | Q2IU52 | + | 1687144 - 1690884 | 138236.0 |
| hypothetical protein | PQ455_08015 | Not Available | - | 1690944 - 1691120 | 6364.95 |
| abc transporter substrate-binding protein | PQ455_08020 | Not Available | - | 1691343 - 1692140 | 27997.4 |
| iron abc transporter permease | PQ455_08025 | O34451 | + | 1692326 - 1693312 | 33152.9 |
| abc transporter atp-binding protein | PQ455_08030 | B0R5G4 | + | 1693306 - 1694082 | 26901.3 |
| primosomal protein n' | PQ455_08035 | P05445 | + | 1694359 - 1696527 | 78620.8 |
| duf1289 domain-containing protein | PQ455_08040 | Not Available | + | 1696524 - 1696700 | 6240.58 |
| hypothetical protein | PQ455_08045 | Not Available | + | 1696757 - 1698340 | 57283.0 |
| hypothetical protein | PQ455_08050 | Not Available | - | 1698360 - 1699055 | 24642.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.