Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | PQ455_07905 | Q9RBP4 | + | 1666105 - 1666812 | 26384.3 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | PQ455_07910 | A0A059WLZ7 | - | 1666814 - 1667863 | 38151.5 |
| tonb-dependent receptor | PQ455_07915 | P0C2M9 | - | 1667884 - 1670073 | 78496.9 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | PQ455_07920 | Q52439 | - | 1670167 - 1670718 | 21744.0 |
| rieske 2fe-2s domain-containing protein | PQ455_07925 | P0ABR6 | - | 1670736 - 1672004 | 48621.1 |
| lysr family transcriptional regulator | PQ455_07930 | P23719 | + | 1672312 - 1673241 | 35205.5 |
| is3 family transposase | PQ455_07935 | P24577 | - | 1673338 - 1674458 | 42713.3 |
| hypothetical protein | PQ455_07940 | Not Available | - | 1674612 - 1675019 | 14985.4 |
| ribonucleotide-diphosphate reductase subunit beta | PQ455_07945 | Q91FE8 | - | 1675305 - 1676360 | 40941.0 |
| hypothetical protein | PQ455_07950 | Not Available | - | 1676549 - 1676764 | 7615.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.