Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | PQ455_07755 | P0AD15 | + | 1637161 - 1638234 | 38858.5 |
| hypothetical protein | PQ455_07760 | Not Available | - | 1638221 - 1638781 | 19845.8 |
| histidine kinase | PQ455_07765 | P0AA94 | + | 1638974 - 1640044 | 38565.1 |
| lyttr family dna-binding domain-containing protein | PQ455_07770 | P26275 | + | 1640113 - 1640880 | 27926.7 |
| outer membrane beta-barrel protein | PQ455_07775 | Not Available | + | 1641252 - 1641809 | 19135.7 |
| pas domain-containing protein | PQ455_07780 | Not Available | - | 1641861 - 1642658 | 28526.1 |
| tade/tadg family type iv pilus assembly protein | PQ455_07785 | Not Available | + | 1642950 - 1643402 | 15780.3 |
| tadg family pilus assembly protein | PQ455_07790 | Not Available | + | 1643406 - 1645058 | 56154.6 |
| ku protein | PQ455_07795 | C1F735 | + | 1645234 - 1646145 | 33763.5 |
| dna ligase d | PQ455_07800 | Q9I1X7 | + | 1646148 - 1648646 | 90465.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.