Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_07655 | Not Available | + | 1612087 - 1612317 | 8174.1 |
| phosphatidylcholine/phosphatidylserine synthase | PQ455_07660 | P59949 | - | 1612259 - 1613086 | 29345.2 |
| phosphatidylserine decarboxylase | PQ455_07665 | Q2G8L3 | - | 1613100 - 1613834 | 26613.6 |
| nadp-dependent isocitrate dehydrogenase | PQ455_07670 | P50215 | + | 1613978 - 1615198 | 45927.8 |
| ribonuclease hii | PQ455_07675 | Q50412 | - | 1615257 - 1615889 | 22359.3 |
| sugar transferase | PQ455_07680 | Q44576 | + | 1616081 - 1617463 | 50041.8 |
| hypothetical protein | PQ455_07685 | Not Available | - | 1617532 - 1617879 | 11085.9 |
| insulinase family protein | PQ455_07690 | P55679 | - | 1618058 - 1620880 | 98117.4 |
| gmc family oxidoreductase | PQ455_07695 | Q53U15 | + | 1621121 - 1622674 | 55633.2 |
| trna guanosine(34) transglycosylase tgt | PQ455_07700 | Q2G639 | - | 1622690 - 1623808 | 40621.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.