Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mbl fold metallo-hydrolase | PQ455_07220 | Q7MUY1 | - | 1543128 - 1543892 | 27495.6 |
| tatd family hydrolase | PQ455_07225 | P0AFQ9 | - | 1543889 - 1544668 | 28032.2 |
| methionine--trna ligase | PQ455_07230 | P59078 | - | 1544655 - 1546181 | 55892.1 |
| aaa family atpase | PQ455_07235 | P52024 | - | 1546185 - 1547168 | 34394.5 |
| dtmp kinase | PQ455_07240 | A5V3I6 | - | 1547165 - 1547779 | 21501.6 |
| d-alanyl-d-alanine carboxypeptidase | PQ455_07245 | P44466 | - | 1547776 - 1548951 | 41044.6 |
| septal ring lytic transglycosylase rlpa family protein | PQ455_07250 | A0A0H2ZFV1 | - | 1548984 - 1549856 | 31511.6 |
| lytic murein transglycosylase | PQ455_07255 | P41052 | - | 1549840 - 1550787 | 33919.7 |
| Trna-ser | Not Available | Not Available | + | 1550972 - 1551059 | Not Available |
| integrase arm-type dna-binding domain-containing protein | PQ455_07265 | P08320 | + | 1551217 - 1552482 | 47193.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.