Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | PQ455_07170 | V5YMB3 | + | 1531126 - 1532988 | 66904.1 |
| duf839 domain-containing protein | PQ455_07175 | Not Available | - | 1533051 - 1535522 | 85910.3 |
| 30s ribosomal protein s4 | PQ455_07180 | A5V5E0 | - | 1535708 - 1536322 | 23069.0 |
| rna methyltransferase | PQ455_07185 | A7MGX5 | - | 1536480 - 1537223 | 26487.0 |
| duf418 domain-containing protein | PQ455_07190 | P42107 | + | 1537367 - 1538737 | 49909.7 |
| spor domain-containing protein | PQ455_07195 | Not Available | - | 1538778 - 1539737 | 33456.0 |
| cobyric acid synthase | PQ455_07200 | A5VFK5 | + | 1539844 - 1541286 | 50390.2 |
| nucleoside triphosphate pyrophosphohydrolase | PQ455_07205 | P0AEY4 | - | 1541270 - 1542013 | 27047.1 |
| hypothetical protein | PQ455_07210 | Not Available | - | 1542085 - 1542861 | 27997.3 |
| hypothetical protein | PQ455_07215 | Not Available | + | 1542983 - 1543120 | 4383.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.