Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secf | PQ455_07120 | O33518 | + | 1521105 - 1522079 | 34995.4 |
| mth938/ndufaf3 family protein | PQ455_07125 | P29962 | + | 1522079 - 1522462 | 13178.0 |
| hypothetical protein | PQ455_07130 | Not Available | + | 1522593 - 1524170 | 57459.4 |
| outer membrane protein assembly factor bamd | PQ455_07135 | Q9A6U9 | + | 1524257 - 1525057 | 30461.4 |
| ynfa family protein | PQ455_07140 | Q2IXI5 | + | 1525131 - 1525460 | 11511.2 |
| nad(p)/fad-dependent oxidoreductase | PQ455_07145 | P37631 | + | 1525497 - 1526678 | 41755.1 |
| gnat family n-acetyltransferase | PQ455_07150 | Not Available | - | 1526683 - 1527153 | 16725.0 |
| n-carbamoylputrescine amidase | PQ455_07155 | Q8VYF5 | - | 1527174 - 1528019 | 30976.0 |
| agmatine deiminase family protein | PQ455_07160 | A4VFL7 | - | 1528205 - 1529194 | 34760.6 |
| m28 family metallopeptidase | PQ455_07165 | P91406 | - | 1529191 - 1530819 | 57908.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.