Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_06920 | Not Available | + | 1484362 - 1484799 | 14387.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | PQ455_06925 | P0ADY0 | - | 1484972 - 1485490 | 18324.9 |
| pseudouridine synthase | PQ455_06930 | Q4UL59 | - | 1485492 - 1486409 | 33582.7 |
| phosphoserine transaminase | PQ455_06935 | P52878 | + | 1486539 - 1487693 | 41432.5 |
| phosphoglycerate dehydrogenase | PQ455_06940 | P73821 | + | 1487829 - 1489406 | 55464.2 |
| duf559 domain-containing protein | PQ455_06945 | P45736 | + | 1489454 - 1489846 | 14590.6 |
| atp phosphoribosyltransferase regulatory subunit | PQ455_06950 | Q2W2D0 | + | 1489843 - 1490952 | 39440.8 |
| adenylosuccinate synthase | PQ455_06955 | A5VFF3 | + | 1490971 - 1492260 | 46037.0 |
| arylamine n-acetyltransferase | PQ455_06960 | Q00267 | + | 1492275 - 1493099 | 30079.0 |
| phzf family phenazine biosynthesis protein | PQ455_06965 | Q9I073 | - | 1493123 - 1493908 | 27755.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.