Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit gamma/tau | PQ455_06820 | P06710 | + | 1459227 - 1460831 | 57179.9 |
| ybab/ebfc family nucleoid-associated protein | PQ455_06825 | B1YRE8 | + | 1460828 - 1461163 | 11480.0 |
| dna repair protein recn | PQ455_06830 | Q87BS5 | + | 1461285 - 1462946 | 58055.9 |
| atp-dependent helicase hrpb | PQ455_06835 | P37024 | + | 1463212 - 1465701 | 87735.3 |
| etc complex i subunit | PQ455_06840 | Q9FJW4 | + | 1465754 - 1466053 | 10824.7 |
| glutathione-disulfide reductase | PQ455_06845 | P48639 | + | 1466110 - 1467456 | 48664.5 |
| dead/deah box helicase | PQ455_06850 | P25888 | - | 1467731 - 1469245 | 54988.7 |
| hypothetical protein | PQ455_06855 | Not Available | - | 1469353 - 1469778 | 15431.0 |
| fad-binding oxidoreductase | PQ455_06860 | Q1JPD3 | + | 1469875 - 1471323 | 49542.8 |
| sapc family protein | PQ455_06865 | Not Available | + | 1471387 - 1472196 | 30406.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.