Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | PQ455_06720 | A9H9B7 | - | 1440159 - 1440776 | 22855.4 |
| terc family protein | PQ455_06725 | P0AEC2 | - | 1440832 - 1441626 | 28367.3 |
| cold-shock protein | PQ455_06730 | P55390 | + | 1441899 - 1442735 | 27446.9 |
| hypothetical protein | PQ455_06735 | Not Available | + | 1443122 - 1443952 | 30431.4 |
| bestrophin family ion channel | PQ455_06740 | Q98E66 | - | 1444043 - 1444927 | 32458.6 |
| hypothetical protein | PQ455_06745 | Not Available | - | 1444949 - 1445185 | 8313.19 |
| lysr family transcriptional regulator | PQ455_06750 | P76250 | + | 1445422 - 1446330 | 32701.3 |
| aminotransferase class v-fold plp-dependent enzyme | PQ455_06755 | P18549 | + | 1446380 - 1447681 | 47130.9 |
| sugar phosphate isomerase/epimerase | PQ455_06760 | Not Available | - | 1447683 - 1448510 | 28952.1 |
| gtpase era | PQ455_06765 | Q2NB82 | - | 1448621 - 1449538 | 33495.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.