Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | PQ455_06520 | Not Available | - | 1393311 - 1393880 | 20208.4 |
| hypothetical protein | PQ455_06525 | Not Available | - | 1393941 - 1394390 | 16134.9 |
| hypothetical protein | PQ455_06530 | Not Available | + | 1394517 - 1394771 | 8908.59 |
| carbonic anhydrase | PQ455_06535 | P27140 | - | 1394851 - 1395483 | 22631.1 |
| lipoyl synthase | PQ455_06540 | A5V2U6 | + | 1395551 - 1396504 | 34676.8 |
| type ii toxin-antitoxin system rata family toxin | PQ455_06545 | Q6PBN4 | + | 1396636 - 1397112 | 17654.0 |
| cina family protein | PQ455_06550 | P51967 | - | 1397058 - 1397570 | 17281.8 |
| hypothetical protein | PQ455_06555 | Not Available | - | 1397567 - 1398115 | 19430.0 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | PQ455_06560 | A5V2U9 | - | 1398112 - 1399254 | 38950.7 |
| trna dihydrouridine synthase dusb | PQ455_06565 | P45672 | + | 1399347 - 1400345 | 36264.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.