Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | PQ455_06470 | P26402 | + | 1383038 - 1384291 | 46054.0 |
| vgr related protein | PQ455_06475 | Q9I6M7 | - | 1384314 - 1384757 | 16755.3 |
| molecular chaperone dnaj | PQ455_06480 | Q5NPS5 | - | 1384780 - 1385913 | 40283.6 |
| molecular chaperone dnak | PQ455_06485 | A5V5P9 | - | 1386056 - 1387954 | 67653.1 |
| copper chaperone pcu(a)c | PQ455_06490 | Not Available | + | 1388115 - 1388570 | 15712.2 |
| lysr family transcriptional regulator | PQ455_06495 | Q08385 | - | 1388783 - 1389160 | 12843.7 |
| m20/m25/m40 family metallo-hydrolase | PQ455_06500 | Q9WVJ3 | - | 1389166 - 1390578 | 49015.3 |
| energy-dependent translational throttle protein etta | PQ455_06505 | P9WQK2 | + | 1390678 - 1392357 | 62262.9 |
| hypothetical protein | PQ455_06510 | Not Available | + | 1392354 - 1392836 | 17829.5 |
| nucleoside deaminase | PQ455_06515 | P78594 | + | 1392836 - 1393300 | 16765.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.