Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | PQ455_06420 | P22930 | - | 1371361 - 1372419 | 38308.7 |
| abc transporter permease | PQ455_06425 | P32015 | - | 1372553 - 1373302 | 27868.9 |
| polysaccharide export protein | PQ455_06430 | P22236 | - | 1373424 - 1374644 | 43515.4 |
| abc transporter atp-binding protein | PQ455_06435 | P10640 | - | 1374682 - 1375344 | 24226.1 |
| glycosyltransferase family 1 protein | PQ455_06440 | C7Q4Y6 | + | 1375486 - 1376589 | 39230.6 |
| glycosyltransferase family 1 protein | PQ455_06445 | P26402 | + | 1376619 - 1377950 | 48680.6 |
| hypothetical protein | PQ455_06450 | Not Available | + | 1377947 - 1379116 | 42539.2 |
| 3-deoxy-8-phosphooctulonate synthase | PQ455_06455 | C5CSV4 | - | 1379126 - 1379956 | 29040.0 |
| beta-3-deoxy-d-manno-oct-2-ulosonic acid transferase | PQ455_06460 | P42217 | + | 1380149 - 1381774 | 57802.8 |
| capsular biosynthesis protein | PQ455_06465 | Q05014 | + | 1381771 - 1383024 | 46738.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.