Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose 4,6-dehydratase | PQ455_06370 | O85713 | - | 1354929 - 1355996 | 40256.8 |
| nad-dependent epimerase/dehydratase family protein | PQ455_06375 | Q9HTB6 | - | 1356155 - 1357141 | 34651.0 |
| gdp-mannose 4,6-dehydratase | PQ455_06380 | Q51366 | - | 1357154 - 1358152 | 37012.2 |
| class i sam-dependent methyltransferase | PQ455_06385 | Q8PK00 | - | 1358394 - 1359635 | 45830.0 |
| glycosyltransferase | PQ455_06390 | A1SP12 | - | 1359676 - 1362252 | 93526.7 |
| duf4214 domain-containing protein | PQ455_06395 | Not Available | - | 1362264 - 1363166 | 32827.9 |
| fkbm family methyltransferase | PQ455_06400 | Not Available | + | 1363688 - 1364869 | 42753.0 |
| hypothetical protein | PQ455_06405 | P40892 | - | 1364938 - 1366278 | 48445.7 |
| glycosyltransferase family 1 protein | PQ455_06410 | Q9H553 | - | 1366472 - 1368433 | 72004.4 |
| glycosyltransferase family 1 protein | PQ455_06415 | D0L476 | + | 1368627 - 1371014 | 87754.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.