Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malate synthase g | PQ455_06170 | A5VS09 | + | 1306334 - 1308430 | 74531.0 |
| gamma carbonic anhydrase family protein | PQ455_06175 | P40882 | + | 1308558 - 1309091 | 17880.6 |
| nadp-dependent malic enzyme | PQ455_06180 | O30807 | + | 1309221 - 1311488 | 80101.2 |
| pas domain s-box protein | PQ455_06185 | Q881J7 | - | 1311492 - 1314707 | 118085.0 |
| molybdenum cofactor biosynthesis protein b | PQ455_06190 | P0AF00 | - | 1314863 - 1315390 | 19044.7 |
| transglycosylase slt domain-containing protein | PQ455_06195 | P0AGC4 | - | 1315390 - 1317186 | 62281.9 |
| uracil-dna glycosylase family protein | PQ455_06200 | Not Available | - | 1317183 - 1317875 | 24077.8 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | PQ455_06205 | Q9HZP5 | + | 1318014 - 1319651 | 59467.9 |
| tetratricopeptide repeat protein | PQ455_06210 | P42810 | + | 1319703 - 1321433 | 60494.5 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | PQ455_06215 | A5VDT3 | + | 1321430 - 1322293 | 28997.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.