Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | PQ455_06120 | P23843 | - | 1297996 - 1299507 | 54459.7 |
| Trna-leu | Not Available | Not Available | + | 1299524 - 1299609 | Not Available |
| integration host factor subunit beta | PQ455_06130 | Q9A2H5 | - | 1299667 - 1299951 | 10386.5 |
| 30s ribosomal protein s1 | PQ455_06135 | P14129 | - | 1300180 - 1301904 | 62170.6 |
| (d)cmp kinase | PQ455_06140 | A7IEB7 | - | 1302091 - 1302726 | 21990.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | PQ455_06145 | Q1GT16 | - | 1302860 - 1304200 | 45808.5 |
| tigr02300 family protein | PQ455_06150 | Not Available | + | 1304309 - 1304620 | 11428.9 |
| Trna-ala | Not Available | Not Available | + | 1304718 - 1304793 | Not Available |
| rieske (2fe-2s) protein | PQ455_06160 | Q8GI16 | - | 1304860 - 1305237 | 13204.9 |
| lysr family transcriptional regulator | PQ455_06165 | Q0TD46 | - | 1305318 - 1306229 | 32728.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.