Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| organic hydroperoxide resistance protein | PQ455_06020 | P0A0V4 | - | 1279428 - 1279853 | 14292.9 |
| prolyl oligopeptidase family serine peptidase | PQ455_06025 | Q6F3I7 | - | 1280013 - 1282046 | 72975.1 |
| 3-isopropylmalate dehydratase large subunit | PQ455_06030 | Q1GR84 | + | 1282174 - 1283613 | 50434.2 |
| n-acyl homoserine lactonase family protein | PQ455_06035 | Q9L8R8 | + | 1283610 - 1284455 | 29672.8 |
| type ii toxin-antitoxin system prevent-host-death family antitoxin | PQ455_06040 | Not Available | + | 1284518 - 1284790 | 9985.95 |
| type ii toxin-antitoxin system vapc family toxin | PQ455_06045 | Q8ZZP3 | + | 1284790 - 1285206 | 15209.2 |
| 3-isopropylmalate dehydratase small subunit | PQ455_06050 | Q2G955 | + | 1285208 - 1285789 | 20838.9 |
| duf1476 domain-containing protein | PQ455_06055 | Not Available | + | 1285872 - 1286195 | 11884.9 |
| bola family transcriptional regulator | PQ455_06060 | P73055 | + | 1286200 - 1286445 | 8508.17 |
| grx4 family monothiol glutaredoxin | PQ455_06065 | P73056 | + | 1286450 - 1286785 | 12260.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.