Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | PQ455_05920 | P52477 | + | 1255081 - 1256271 | 43345.8 |
| multidrug efflux rnd transporter permease subunit | PQ455_05925 | Q8G2M6 | + | 1256285 - 1259470 | 112947.0 |
| tolc family protein | PQ455_05930 | Q51397 | + | 1259467 - 1260954 | 51753.9 |
| hypothetical protein | PQ455_05935 | Not Available | - | 1261061 - 1261204 | 4880.68 |
| hypothetical protein | PQ455_05940 | Not Available | + | 1261412 - 1261675 | 9775.6 |
| asma family protein | PQ455_05945 | P37645 | - | 1261725 - 1263590 | 66027.5 |
| hypothetical protein | PQ455_05950 | Not Available | + | 1263775 - 1264017 | 8473.44 |
| hypothetical protein | PQ455_05955 | Not Available | + | 1264090 - 1264281 | 7113.4 |
| yoze family protein | PQ455_05960 | Not Available | + | 1264395 - 1264643 | 8939.23 |
| alpha/beta hydrolase | PQ455_05965 | O31158 | - | 1264787 - 1265611 | 29383.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.