Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_05720 | Not Available | + | 1198024 - 1198497 | 16310.1 |
| isocitrate lyase | PQ455_05725 | Q9I0K4 | - | 1198628 - 1200223 | 59289.1 |
| duf481 domain-containing protein | PQ455_05730 | P76206 | - | 1200361 - 1201191 | 30691.2 |
| rna pyrophosphohydrolase | PQ455_05735 | Q1GSV9 | - | 1201336 - 1201806 | 17588.0 |
| alpha/beta hydrolase | PQ455_05740 | P95125 | - | 1201803 - 1202801 | 34959.0 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | PQ455_05745 | A6W3C9 | - | 1202822 - 1203745 | 32922.9 |
| purine nucleoside permease | PQ455_05750 | O74493 | + | 1203891 - 1205036 | 40240.1 |
| tonb-dependent receptor | PQ455_05755 | P38370 | + | 1205055 - 1208354 | 117625.0 |
| hypothetical protein | PQ455_05760 | Not Available | + | 1208546 - 1208923 | 13495.0 |
| alanine--trna ligase | PQ455_05765 | A5V3L0 | + | 1208999 - 1211665 | 94748.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.