Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | PQ455_05620 | A1JJB8 | + | 1181585 - 1182349 | 27814.8 |
| nad(p)h-hydrate dehydratase | PQ455_05625 | Q8PBP3 | + | 1182346 - 1183200 | 28177.2 |
| n-acetylmuramoyl-l-alanine amidase | PQ455_05630 | P75820 | + | 1183285 - 1183998 | 26318.6 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | + | 1184156 - 1184517 | Not Available |
| lysr substrate-binding domain-containing protein | PQ455_05640 | P52667 | - | 1184667 - 1185632 | 35354.1 |
| peroxiredoxin | PQ455_05645 | A0R1V9 | + | 1185744 - 1186289 | 19724.3 |
| carboxymuconolactone decarboxylase family protein | PQ455_05650 | A5VCB6 | + | 1186464 - 1186982 | 18299.1 |
| serine acetyltransferase | PQ455_05655 | Q06750 | + | 1187111 - 1187815 | 26012.4 |
| duf2794 domain-containing protein | PQ455_05660 | Not Available | + | 1187815 - 1188153 | 12749.5 |
| hypothetical protein | PQ455_05665 | Not Available | - | 1188262 - 1189362 | 39431.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.