Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| plasmid stabilization protein | PQ455_05520 | P55510 | + | 1164177 - 1164422 | 9095.01 |
| type ii toxin-antitoxin system vapc family toxin | PQ455_05525 | P55511 | + | 1164419 - 1164841 | 15355.6 |
| hypothetical protein | PQ455_05530 | Not Available | + | 1164924 - 1165169 | 9452.26 |
| duf2155 domain-containing protein | PQ455_05535 | P10427 | + | 1165188 - 1166267 | 40237.3 |
| Trna-arg | Not Available | Not Available | + | 1166844 - 1166920 | Not Available |
| hypothetical protein | PQ455_05545 | Not Available | - | 1167003 - 1167407 | 14310.4 |
| endonuclease iii | PQ455_05550 | P44319 | - | 1167410 - 1168078 | 24588.8 |
| 4-hydroxy-tetrahydrodipicolinate reductase | PQ455_05555 | Q5NPM9 | - | 1168088 - 1168828 | 24708.5 |
| trimeric intracellular cation channel family protein | PQ455_05560 | Q9R9S0 | - | 1168913 - 1169572 | 22369.7 |
| torf family putative porin | PQ455_05565 | Not Available | - | 1170741 - 1171577 | 29048.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.