Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PQ455_05370 | P71318 | + | 1138041 - 1138964 | 33059.8 |
| hypothetical protein | PQ455_05375 | Not Available | + | 1138994 - 1139302 | 10712.0 |
| duf2274 domain-containing protein | PQ455_05380 | Not Available | - | 1139313 - 1139537 | 7960.76 |
| trbi/virb10 family protein | PQ455_05385 | P54917 | - | 1139534 - 1140760 | 42690.6 |
| p-type conjugative transfer protein trbg | PQ455_05390 | P54915 | - | 1140757 - 1141773 | 36557.6 |
| conjugal transfer protein trbf | PQ455_05395 | P54914 | - | 1141770 - 1142453 | 25274.1 |
| p-type conjugative transfer protein trbl | PQ455_05400 | P55402 | - | 1142457 - 1143767 | 42948.3 |
| putative entry exclusion protein trbk-alt | PQ455_05405 | Not Available | - | 1143769 - 1144071 | 10531.6 |
| p-type conjugative transfer protein trbj | PQ455_05410 | P54911 | - | 1144077 - 1144835 | 26947.8 |
| conjugal transfer protein trbe | PQ455_05415 | P54910 | - | 1144832 - 1147321 | 91135.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.