Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s)-binding protein | PQ455_05320 | Q8X6I9 | + | 1127264 - 1127743 | 16734.1 |
| xanthine dehydrogenase family protein subunit m | PQ455_05325 | P77324 | + | 1127740 - 1128750 | 35568.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | PQ455_05330 | P77489 | + | 1128763 - 1131105 | 82748.6 |
| lysr family transcriptional regulator | PQ455_05335 | P72131 | - | 1131449 - 1132384 | 34138.2 |
| coce/nond family hydrolase | PQ455_05340 | P9WIQ8 | + | 1132500 - 1134143 | 61863.9 |
| sdr family nad(p)-dependent oxidoreductase | PQ455_05345 | Q988B7 | + | 1134140 - 1134880 | 26188.6 |
| alkene reductase | PQ455_05350 | P77258 | + | 1134895 - 1135986 | 39547.7 |
| alpha/beta hydrolase | PQ455_05355 | Q6NAM1 | + | 1135983 - 1136849 | 30817.6 |
| hypothetical protein | PQ455_05360 | Not Available | + | 1136867 - 1137262 | 14253.0 |
| glutathione s-transferase family protein | PQ455_05365 | P0A9D3 | + | 1137315 - 1137956 | 23269.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.