Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetyl-gamma-glutamyl-phosphate reductase | PQ455_05170 | Q9A8H5 | - | 1092277 - 1093215 | 32483.9 |
| c40 family peptidase | PQ455_05175 | P39043 | - | 1093218 - 1094156 | 32512.0 |
| marr family winged helix-turn-helix transcriptional regulator | PQ455_05180 | O34949 | - | 1094080 - 1094412 | 12018.6 |
| leucyl aminopeptidase family protein | PQ455_05185 | A7NG41 | - | 1094573 - 1095955 | 47897.1 |
| serine hydrolase | PQ455_05190 | P37321 | - | 1095990 - 1097084 | 38366.8 |
| mfs transporter | PQ455_05195 | A0QYL8 | - | 1097180 - 1098472 | 45821.0 |
| hwe histidine kinase domain-containing protein | PQ455_05200 | Q9R6X3 | - | 1098499 - 1101057 | 92271.5 |
| biliverdin-producing heme oxygenase | PQ455_05205 | A0A0H2XEA6 | - | 1101054 - 1101581 | 18699.1 |
| glycosyltransferase | PQ455_05210 | Q81AF4 | + | 1101745 - 1105080 | 121751.0 |
| hypothetical protein | PQ455_05215 | Not Available | - | 1105110 - 1106003 | 31438.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.