Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | PQ455_05120 | A4WB82 | + | 1084046 - 1084678 | 22226.3 |
| amidohydrolase | PQ455_05125 | Q8GGD4 | + | 1084718 - 1086028 | 45343.2 |
| four-helix bundle copper-binding protein | PQ455_05130 | O07571 | - | 1086121 - 1086510 | 13887.9 |
| acp s-malonyltransferase | PQ455_05135 | P0AAJ0 | + | 1086640 - 1087575 | 32232.1 |
| gxxexxy protein | PQ455_05140 | Not Available | + | 1087804 - 1088220 | 15302.8 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | PQ455_05145 | P72332 | + | 1088231 - 1088971 | 25124.5 |
| acyl carrier protein | PQ455_05150 | Q2G8P0 | + | 1089190 - 1089426 | 8473.85 |
| beta-ketoacyl-acp synthase ii | PQ455_05155 | P56902 | + | 1089574 - 1090833 | 43837.5 |
| endolytic transglycosylase mltg | PQ455_05160 | P28306 | + | 1090838 - 1091836 | 35886.4 |
| hypothetical protein | PQ455_05165 | Not Available | + | 1091938 - 1092156 | 7311.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.