Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | PQ455_05020 | A5V8U0 | + | 1059067 - 1060386 | 48736.2 |
| lipoprotein-releasing abc transporter permease subunit | PQ455_05025 | P57061 | + | 1060628 - 1061878 | 44620.4 |
| abc transporter atp-binding protein | PQ455_05030 | Q2G7G7 | + | 1061871 - 1062542 | 23858.6 |
| pilus assembly protein tadg-related protein | PQ455_05035 | Not Available | + | 1062744 - 1065197 | 79666.6 |
| pilus assembly protein | PQ455_05040 | Not Available | + | 1065200 - 1065685 | 16859.2 |
| tade/tadg family type iv pilus assembly protein | PQ455_05045 | Not Available | + | 1065682 - 1066083 | 13979.9 |
| cysteine synthase a | PQ455_05050 | Q59447 | - | 1066195 - 1067109 | 32166.8 |
| mfs transporter | PQ455_05055 | A8AJL6 | - | 1067106 - 1068404 | 46256.4 |
| nad(+) diphosphatase | PQ455_05060 | Q29RH3 | - | 1068517 - 1069389 | 30726.3 |
| n-formylglutamate amidohydrolase | PQ455_05065 | Q9HU92 | - | 1069438 - 1070319 | 31075.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.