Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | PQ455_04970 | B7LNJ1 | + | 1049118 - 1050392 | 44552.5 |
| sam-dependent methyltransferase | PQ455_04975 | Q9VGR2 | - | 1050410 - 1051372 | 33882.3 |
| prolipoprotein diacylglyceryl transferase | PQ455_04980 | A5V5N0 | - | 1051488 - 1052351 | 31412.6 |
| duf5818 domain-containing protein | PQ455_04985 | Not Available | + | 1052536 - 1052736 | 7201.85 |
| bifunctional dna-binding transcriptional regulator/o6-methylguanine-dna methyltransferase ada | PQ455_04990 | P06134 | + | 1052833 - 1053918 | 37705.7 |
| dna oxidative demethylase alkb | PQ455_04995 | P37462 | + | 1053915 - 1054553 | 22270.8 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | PQ455_05000 | P27833 | - | 1054558 - 1055739 | 41823.8 |
| hypothetical protein | PQ455_05005 | Not Available | - | 1055736 - 1056560 | 29827.2 |
| glycosyltransferase family 61 protein | PQ455_05010 | Not Available | + | 1056687 - 1057814 | 42831.7 |
| dna repair protein reco | PQ455_05015 | A5VEW5 | + | 1057858 - 1058586 | 25017.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.