Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter kup | PQ455_04770 | A5V804 | - | 1011495 - 1013441 | 70494.6 |
| low affinity iron permease family protein | PQ455_04775 | Q9HFE1 | + | 1013719 - 1014141 | 15930.1 |
| hypothetical protein | PQ455_04780 | Not Available | + | 1014213 - 1014419 | 7856.81 |
| thioredoxin-disulfide reductase | PQ455_04785 | Q92I02 | + | 1014523 - 1015506 | 34927.6 |
| hypothetical protein | PQ455_04790 | Not Available | + | 1015621 - 1015968 | 13159.6 |
| mfs transporter | PQ455_04795 | Q92I85 | - | 1016074 - 1017447 | 48313.8 |
| response regulator | PQ455_04800 | Not Available | - | 1017501 - 1017875 | 12617.1 |
| hwe histidine kinase domain-containing protein | PQ455_04805 | Q2YKK7 | - | 1017872 - 1019833 | 71031.5 |
| short-chain fatty acyl-coa regulator family protein | PQ455_04810 | P9WMI0 | + | 1020021 - 1021412 | 49300.3 |
| methyl-accepting chemotaxis protein | PQ455_04815 | Q9HUW6 | - | 1021430 - 1022962 | 53478.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.