Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transketolase | PQ455_04720 | Q8NNF6 | + | 997621 - 999963 | 84837.7 |
| dihydrolipoamide acetyltransferase family protein | PQ455_04725 | O66119 | + | 999965 - 1001236 | 44254.9 |
| biosynthetic-type acetolactate synthase large subunit | PQ455_04730 | P00893 | + | 1001269 - 1003017 | 62097.8 |
| lysr family transcriptional regulator | PQ455_04735 | P52686 | + | 1003151 - 1004050 | 33208.9 |
| hypothetical protein | PQ455_04740 | G4NYJ6 | + | 1004284 - 1007784 | 129191.0 |
| hypothetical protein | PQ455_04745 | Not Available | + | 1007793 - 1008200 | 14575.5 |
| transposase | PQ455_04750 | P43965 | + | 1008528 - 1009196 | 25037.7 |
| hypothetical protein | PQ455_04755 | Not Available | + | 1009230 - 1010108 | 32625.5 |
| Trna-ser | Not Available | Not Available | + | 1010225 - 1010315 | Not Available |
| peptidylprolyl isomerase | PQ455_04765 | P72704 | + | 1010419 - 1011444 | 35761.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.