Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | PQ455_04670 | Not Available | + | 987779 - 988228 | 16742.9 |
| sdr family nad(p)-dependent oxidoreductase | PQ455_04675 | M2ZIX7 | + | 988302 - 989144 | 29543.8 |
| tonb-dependent receptor | PQ455_04680 | P0C2M9 | + | 989247 - 991691 | 88733.0 |
| fumarylacetoacetate hydrolase family protein | PQ455_04685 | Q6GLT8 | - | 991749 - 992600 | 31012.0 |
| muconolactone delta-isomerase | PQ455_04690 | Q9I0X4 | - | 992629 - 992919 | 10993.4 |
| muconate cycloisomerase family protein | PQ455_04695 | O33946 | - | 992922 - 994076 | 40639.2 |
| cupin domain-containing protein | PQ455_04700 | Not Available | - | 994127 - 994591 | 17344.6 |
| fad-dependent oxidoreductase | PQ455_04705 | Q51973 | + | 994828 - 996135 | 45575.9 |
| ferredoxin | PQ455_04710 | P18325 | + | 996132 - 996326 | 6811.12 |
| cytochrome p450 | PQ455_04715 | P18327 | + | 996331 - 997557 | 45177.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.