Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2254 domain-containing protein | PQ455_04570 | P9WM35 | - | 961475 - 962881 | 50849.3 |
| sodium:proton antiporter | PQ455_04575 | G3XD29 | - | 962878 - 964149 | 44463.8 |
| duf389 domain-containing protein | PQ455_04580 | Q58091 | - | 964146 - 965708 | 54831.0 |
| permease | PQ455_04585 | I6YET7 | - | 965705 - 966811 | 39989.7 |
| mechanosensitive ion channel family protein | PQ455_04590 | O28726 | - | 966808 - 967770 | 34567.9 |
| slc13 family permease | PQ455_04595 | P72958 | - | 967828 - 969633 | 63432.8 |
| potassium channel family protein | PQ455_04600 | P56509 | + | 969717 - 970751 | 37615.7 |
| duf2155 domain-containing protein | PQ455_04605 | Not Available | - | 971069 - 971155 | 3090.6 |
| coa transferase | PQ455_04610 | A0A2I6PIZ1 | + | 971268 - 973040 | 64676.0 |
| serine hydrolase | PQ455_04615 | P71778 | - | 973053 - 974252 | 42650.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.