Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mycobacterium avium subsp. paratuberculosis JIII-386
Accession NumberCP042454.1
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, cytochrome b556 subunit | CDQ89_03035 | O53368 | + | 626172 - 626609 | 16395.5 |
| succinate dehydrogenase hydrophobic membrane anchor subunit | CDQ89_03040 | Not Available | + | 626606 - 627076 | 18003.9 |
| succinate dehydrogenase flavoprotein subunit | CDQ89_03045 | Q92J97 | + | 627084 - 628838 | 64348.7 |
| succinate dehydrogenase iron-sulfur subunit | CDQ89_03050 | P07014 | + | 628839 - 629642 | 29858.0 |
| carboxymuconolactone decarboxylase family protein | CDQ89_03055 | P76222 | + | 629829 - 630443 | 22545.6 |
| sigma-70 family rna polymerase sigma factor | CDQ89_03060 | L0TCG5 | - | 630418 - 631326 | 32514.9 |
| aspartate aminotransferase family protein | CDQ89_03065 | O53379 | + | 631373 - 632704 | 48091.2 |
| hypothetical protein | CDQ89_03070 | Not Available | - | 632679 - 632930 | 9110.95 |
| d-alanyl-d-alanine carboxypeptidase | CDQ89_03075 | O53380 | + | 633144 - 634403 | 42714.8 |
| sugar porter family mfs transporter | CDQ89_03080 | P0AEP2 | + | 634409 - 635761 | 47831.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
