Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mycobacterium avium subsp. paratuberculosis JIII-386
Accession NumberCP042454.1
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | CDQ89_09195 | Q9HU72 | + | 1893800 - 1894252 | 16538.8 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | CDQ89_09200 | P9WF18 | + | 1894433 - 1894693 | 9635.62 |
| type ii toxin-antitoxin system vapc family toxin | CDQ89_09205 | P96917 | + | 1894690 - 1895097 | 14419.3 |
| protein kinase | CDQ89_09210 | Q7U095 | - | 1895244 - 1896809 | 56231.3 |
| carboxymuconolactone decarboxylase family protein | CDQ89_09215 | Not Available | + | 1897046 - 1897567 | 19317.9 |
| carboxymuconolactone decarboxylase family protein | CDQ89_09220 | Not Available | + | 1897564 - 1898109 | 20060.3 |
| tetr/acrr family transcriptional regulator | CDQ89_09225 | Not Available | + | 1898230 - 1898760 | 20048.9 |
| rna polymerase sigma factor sigm | CDQ89_09230 | P9WJA0 | - | 1898749 - 1899922 | 42232.2 |
| n-acetylmuramoyl-l-alanine amidase | CDQ89_09235 | I6Y4D2 | + | 1899981 - 1900757 | 26060.7 |
| cutinase family protein | CDQ89_09240 | O06793 | - | 1900770 - 1901528 | 25678.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
