Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Mycobacterium
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Mycobacteriaceae |
| Genus | Mycobacterium |
| Species | Mycobacterium avium |
| Strain | JIII-386 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mycobacterium avium subsp. paratuberculosis JIII-386
Accession NumberCP042454.1
Gene Summary
Adenine Count
750759 bp
Thymine Count
752891 bp
Guanine Count
1692430 bp
Cytosine Count
1693027 bp
Genome Length
4889107 bp
Protein-coding Genes
4569 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CDQ89_08245 | Q5PGP5 | + | 1682965 - 1683927 | 33313.2 |
| abc transporter permease | CDQ89_08250 | P77463 | + | 1683924 - 1684730 | 27907.3 |
| rna polymerase sigma factor sigm | CDQ89_08255 | P42064 | + | 1684749 - 1686355 | 56949.1 |
| chorismate synthase | CDQ89_08260 | Q741J9 | + | 1686413 - 1687618 | 41762.9 |
| shikimate kinase | CDQ89_08265 | A0QI60 | + | 1687618 - 1688148 | 18757.6 |
| 3-dehydroquinate synthase | CDQ89_08270 | Q741J7 | + | 1688145 - 1689242 | 38357.4 |
| type ii 3-dehydroquinate dehydratase | CDQ89_08275 | A0QI58 | + | 1689239 - 1689670 | 15221.2 |
| hypothetical protein | CDQ89_08280 | Not Available | - | 1689667 - 1690326 | 23032.6 |
| aminopeptidase p family protein | CDQ89_08285 | P54518 | + | 1690372 - 1691481 | 38978.1 |
| elongation factor p | CDQ89_08290 | A0QI55 | + | 1691569 - 1692132 | 20473.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
