Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | SHINM13_13870 | A5FEA5 | + | 1606238 - 1606879 | 23886.2 |
| hypothetical protein | SHINM13_13880 | A7SVT1 | - | 1606907 - 1607956 | 40112.7 |
| ssra-binding protein | SHINM13_13890 | A5FEB8 | - | 1608024 - 1608476 | 17333.1 |
| hypothetical protein | SHINM13_13900 | Not Available | - | 1608530 - 1609015 | 18720.6 |
| hypothetical protein | SHINM13_13910 | Q5E7H1 | + | 1609062 - 1609295 | 8982.94 |
| alanine acetyltransferase | SHINM13_13920 | O34569 | - | 1609288 - 1609845 | 21595.0 |
| lacx protein | SHINM13_13930 | P42096 | - | 1609854 - 1610708 | 32550.6 |
| peptidase m1 | SHINM13_13940 | Q0J2B5 | + | 1610847 - 1613102 | 84988.4 |
| agmatine deiminase | SHINM13_13950 | C1C6Q3 | - | 1613171 - 1614211 | 39219.9 |
| apolipoprotein acyltransferase | SHINM13_13960 | Q8VYF5 | - | 1614214 - 1615101 | 33171.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
