Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | SHINM13_09550 | Q9KD53 | - | 1158250 - 1158732 | 17623.4 |
| hypothetical protein | SHINM13_09560 | Not Available | - | 1158791 - 1159963 | 43390.9 |
| gliding motility lipoprotein gldj | SHINM13_09570 | Q8R0F3 | + | 1160342 - 1162030 | 64111.8 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SHINM13_09580 | P96613 | + | 1162094 - 1163377 | 47573.9 |
| glycosyl hydrolase family 16 | SHINM13_09590 | P45798 | + | 1163410 - 1164174 | 28179.1 |
| glucosylceramidase | SHINM13_09600 | Q4WBR2 | + | 1164341 - 1165747 | 52003.1 |
| glycosyl hydrolase | SHINM13_09610 | Q56078 | + | 1165828 - 1168053 | 82087.3 |
| dna mismatch repair protein mutt | SHINM13_09620 | Q58549 | + | 1168225 - 1168980 | 28978.2 |
| hypothetical protein | SHINM13_09630 | A0A6C7EEG6 | - | 1169032 - 1170768 | 65270.2 |
| Trna-val | Not Available | Not Available | + | 1170943 - 1171020 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
