Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydratase large subunit | SHINM13_08130 | A5FKC6 | - | 980612 - 982006 | 50114.9 |
| dna-directed dna polymerase | SHINM13_08140 | O51526 | + | 982637 - 987178 | 171853.0 |
| thioredoxin | SHINM13_08150 | P0A4L1 | + | 987293 - 987610 | 11359.7 |
| hypothetical protein | SHINM13_08160 | P9WLX4 | + | 987703 - 988629 | 35785.6 |
| Trna-asp | Not Available | Not Available | + | 988715 - 988789 | Not Available |
| hypothetical protein | SHINM13_08170 | Not Available | + | 989218 - 989628 | 15671.1 |
| crossover junction endodeoxyribonuclease ruvc | SHINM13_08180 | A0LXG7 | + | 989652 - 990206 | 20534.2 |
| four helix bundle protein | SHINM13_08190 | Not Available | + | 990253 - 990627 | 14488.3 |
| coproporphyrinogen iii oxidase | SHINM13_08200 | P54304 | + | 990756 - 991844 | 41020.7 |
| arylformamidase | SHINM13_08210 | Not Available | + | 991937 - 992707 | 28830.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
