Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit a | SHINM13_07740 | A6H1R4 | - | 941045 - 941410 | 13839.4 |
| cold-shock protein | SHINM13_07750 | Q9KN00 | - | 941653 - 941847 | 7085.23 |
| aspartate--trna ligase | SHINM13_07760 | A5FKJ2 | - | 941973 - 943727 | 66141.2 |
| copper transporter | SHINM13_07770 | P25197 | - | 943850 - 947314 | 129180.0 |
| rnd transporter | SHINM13_07780 | C9XVZ5 | - | 947452 - 948615 | 42331.2 |
| transporter | SHINM13_07790 | Q9K2Y1 | - | 948627 - 949973 | 50456.6 |
| tetr family transcriptional regulator | SHINM13_07800 | P96676 | - | 949981 - 950577 | 23106.9 |
| isoprenyl synthetase | SHINM13_07810 | Q53479 | + | 950756 - 951730 | 36683.0 |
| hypothetical protein | SHINM13_07820 | Not Available | + | 951723 - 952082 | 14001.8 |
| alkaline phosphatase | SHINM13_07830 | Q8KRU5 | - | 952084 - 953337 | 48044.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
