Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | SHINM13_05870 | Q7VKW2 | + | 699988 - 700836 | 32676.3 |
| membrane protein | SHINM13_05880 | Not Available | + | 701083 - 701646 | 20904.8 |
| helicase | SHINM13_05890 | Q9H611 | + | 701768 - 704038 | 86940.5 |
| hypothetical protein | SHINM13_05900 | Not Available | - | 704075 - 705010 | 35588.6 |
| dna processing protein dpra | SHINM13_05910 | P43862 | + | 705228 - 706328 | 41073.8 |
| tryptophan--trna ligase | SHINM13_05920 | Q7UQA4 | - | 706451 - 707425 | 36038.1 |
| peptidase m1 | SHINM13_05930 | Q9FY49 | - | 707608 - 709479 | 71370.7 |
| peptidase s8 | SHINM13_05940 | P00781 | - | 709536 - 711077 | 55915.6 |
| mbl fold metallo-hydrolase | SHINM13_05950 | O34760 | - | 711182 - 712042 | 32855.1 |
| iron-sulfur-binding protein | SHINM13_05960 | P72731 | + | 712216 - 712545 | 11911.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
