Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transporter | SHINM13_03400 | Q58957 | + | 392738 - 395089 | 89001.7 |
| asparagine--trna ligase | SHINM13_03410 | Q11Q97 | + | 395261 - 396694 | 54487.8 |
| rna polymerase sigma-54 factor | SHINM13_03420 | Q9S0L2 | + | 396842 - 398245 | 53977.5 |
| thymidine kinase | SHINM13_03430 | Q8A5G4 | - | 398395 - 398985 | 22097.5 |
| hypothetical protein | SHINM13_03440 | Not Available | + | 399177 - 400076 | 35086.6 |
| ribosomal rna small subunit methyltransferase i | SHINM13_03450 | P74038 | + | 400109 - 400822 | 26500.1 |
| monoamine oxidase | SHINM13_03460 | Q556K4 | + | 400823 - 401878 | 39255.8 |
| type iii effector | SHINM13_03470 | Not Available | + | 401891 - 402235 | 12678.8 |
| single-stranded-dna-specific exonuclease recj | SHINM13_03480 | O32044 | + | 402255 - 403943 | 63285.3 |
| mfs transporter | SHINM13_03490 | A8AJL6 | + | 403943 - 405214 | 46030.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
