Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | SHINM13_17450 | P33333 | - | 2008489 - 2009052 | 20967.9 |
| spermidine synthase | SHINM13_17460 | Q8D3Q3 | + | 2009115 - 2009780 | 25594.2 |
| potassium channel protein | SHINM13_17470 | Not Available | + | 2009817 - 2010527 | 27957.2 |
| membrane protein | SHINM13_17480 | P54478 | - | 2010524 - 2011498 | 35376.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | SHINM13_17490 | A5FBA3 | - | 2011556 - 2012281 | 27267.7 |
| atp-dependent exodeoxyribonuclease | SHINM13_17500 | Q5UQ92 | - | 2012353 - 2013669 | 50182.5 |
| hypothetical protein | SHINM13_17510 | Not Available | + | 2013975 - 2014787 | 31514.0 |
| methyltransferase | SHINM13_17520 | O34331 | + | 2014784 - 2015341 | 20979.0 |
| dna polymerase iii, subunit gamma and tau | SHINM13_17530 | P09122 | + | 2015862 - 2016947 | 40419.6 |
| hypothetical protein | SHINM13_17540 | Not Available | + | 2016884 - 2017615 | 27739.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
