Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | SHINM13_15360 | A5FAQ5 | - | 1781644 - 1782462 | 29588.9 |
| hypothetical protein | SHINM13_15370 | Not Available | + | 1782565 - 1782996 | 16438.9 |
| hypothetical protein | SHINM13_15380 | Not Available | + | 1783060 - 1784118 | 40718.8 |
| l-serine ammonia-lyase | SHINM13_15390 | P71349 | - | 1784115 - 1785542 | 52036.8 |
| peptidase m14 | SHINM13_15400 | C5FYJ7 | + | 1785719 - 1788226 | 94805.2 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | SHINM13_15410 | Not Available | - | 1788290 - 1788739 | 16813.4 |
| hypothetical protein | SHINM13_15420 | Q9PFB2 | + | 1788897 - 1789454 | 20005.9 |
| transporter | SHINM13_15430 | Q9PFB3 | + | 1789458 - 1789871 | 15082.1 |
| hypothetical protein | SHINM13_15440 | Q5ZU17 | - | 1789920 - 1790591 | 24973.6 |
| sterol desaturase | SHINM13_15450 | Q6ZNB7 | - | 1790604 - 1791869 | 48904.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
