Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium ammonificans |
| Strain | SHINM13, Flavobacterium Strains: 1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Flavobacterium ammonificans SHINM13, Flavobacterium Strains: 1
Accession NumberAP025185.1
Gene Summary
Adenine Count
785786 bp
Thymine Count
795241 bp
Guanine Count
413838 bp
Cytosine Count
414543 bp
Genome Length
2409408 bp
Protein-coding Genes
2093 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiol reductase thioredoxin | SHINM13_15060 | Q9R6P9 | - | 1738410 - 1738718 | 11445.7 |
| alkyl hydroperoxide reductase | SHINM13_15070 | P21762 | - | 1738791 - 1739429 | 23641.8 |
| hypothetical protein | SHINM13_15080 | P40406 | - | 1739570 - 1741165 | 59230.0 |
| mfs transporter | SHINM13_15090 | P0AE17 | - | 1741171 - 1742442 | 47251.8 |
| hypothetical protein | SHINM13_15100 | O35015 | - | 1742453 - 1743997 | 59682.3 |
| membrane protein | SHINM13_15110 | Q68CP4 | - | 1744065 - 1745333 | 47967.3 |
| anhydro-n-acetylmuramic acid kinase | SHINM13_15120 | Q15RS7 | - | 1745350 - 1746558 | 44178.8 |
| sodium:solute symporter | SHINM13_15130 | Q5E733 | - | 1746570 - 1748078 | 56372.6 |
| n-acetylmuramic acid 6-phosphate etherase | SHINM13_15140 | A0M6M4 | - | 1748114 - 1748926 | 29167.4 |
| susc/raga family tonb-linked outer membrane protein | SHINM13_15150 | T2KPJ3 | + | 1749367 - 1752459 | 112164.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
